Insertion junction: CLIP2.074869_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.074869
Chromosome:chromosome 16
Location:2013414
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g656800 (1 of 2) PTHR12210//PTHR12210:SF70 - NUCLEAR LIM INTERACTOR-INTERACTING FACTOR-RELATED // AT02326P-RELATED 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACACTCGACCGGAATCAGAGGCCAGGCACCTGGCCTTGCATCCAGAACCC
Internal bar code:CATGGACCCCCGTGCAGATGCC

Confirmation - LEAP-Seq

LEAP-Seq distance:283
LEAP-Seq percent confirming:6.25
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:15
LEAP-Seq n unique pos:16

Suggested primers for confirmation by PCR

Suggested primer 1:CGCCATTGCATAGCCTTCAC
Suggested primer 2:ATCTCAGCCAAGGAAGGTGC