Insertion junction: CLIP2.074871_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.074871
Chromosome:chromosome 7
Location:5312063
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g349950 (1 of 1) K03131 - transcription initiation factor TFIID subunit 6 (TAF6) 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGTCTGTCTTTGTGCGTTTTGCTTCTGTTGTTTACAACTCAGGGCCAGCA
Internal bar code:TCGTGAGCGGTATCATCCCTAC

Confirmation - LEAP-Seq

LEAP-Seq distance:3741
LEAP-Seq percent confirming:96.3636
LEAP-Seq n confirming:53
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:55

Suggested primers for confirmation by PCR

Suggested primer 1:GCGGGGAAAGTGGAGTTGTA
Suggested primer 2:GAGCAGGATACGACGTGAGG