Insertion junction: CLIP2.074877_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.074877
Chromosome:chromosome 6
Location:8222274
Confidence (%):40
Locus systematic id Locus common name Defline Feature
Cre06.g306400 (1 of 1) 4.4.1.14 - 1-aminocyclopropane-1-carboxylate synthase / S-adenosyl-L-methionine methylthioadenosine-lyase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGCAATGTGTGTTAAAAGGGCAAGTCGTCAAGCGTTAACGCGTTTGTGAG
Internal bar code:CAAGAGTTGTTTGTGTCATTGG

Confirmation - LEAP-Seq

LEAP-Seq distance:1175
LEAP-Seq percent confirming:30.4348
LEAP-Seq n confirming:7
LEAP-Seq n nonconfirming:16
LEAP-Seq n unique pos:23

Suggested primers for confirmation by PCR

Suggested primer 1:ATTTGTGTGTGCGAGTGTGC
Suggested primer 2:GAGTATTGGGTTCGGGCACA