Insertion junction: CLIP2.074888_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.074888
Chromosome:chromosome 17
Location:1596922
Confidence (%):40
Locus systematic id Locus common name Defline Feature
Cre17.g707400 (1 of 1) PF00013//PF13014 - KH domain (KH_1) // KH domain (KH_3) 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCGCAACCAGGCCATGCCAAACCGCGGCTGTCCTGCCATCGGAAAACAGA
Internal bar code:CATGAGGAGATATGTCTGTTTG

Confirmation - LEAP-Seq

LEAP-Seq distance:265
LEAP-Seq percent confirming:50.0
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:2

Suggested primers for confirmation by PCR

Suggested primer 1:CGGATCCGTACCAGCAGTAC
Suggested primer 2:CACGAGGATTCCGTAGCTCC