Insertion junction: CLIP2.074895_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.074895
Chromosome:chromosome 3
Location:5229783
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g181950 outside_mRNA

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCACAAACGCCATGCGTCTCAACGCATAGGGCGTAGGCGGTCCCGTCACT
Internal bar code:GAGACTCTACTGTCGACGGCGC

Confirmation - LEAP-Seq

LEAP-Seq distance:4326
LEAP-Seq percent confirming:81.3333
LEAP-Seq n confirming:61
LEAP-Seq n nonconfirming:14
LEAP-Seq n unique pos:75

Suggested primers for confirmation by PCR

Suggested primer 1:GTTCGGGTGCATGACAACAC
Suggested primer 2:ACATGTGATGCCCCTTCTGG