Insertion junction: CLIP2.074901_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.074901
Chromosome:chromosome 6
Location:8579463
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g309717 (1 of 1) PTHR12735//PTHR12735:SF22//PTHR12735:SF3 - BOLA-LIKE PROTEIN-RELATED // SUBFAMILY NOT NAMED // PROTEIN T12D8.10-RELATED 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTTGCCATTGAGCTGCATGAGCAAACACGTGTTCTTGTACGGGTGTGCTT
Internal bar code:TACCAAATCAACAGGTTACAGC

Confirmation - LEAP-Seq

LEAP-Seq distance:1411
LEAP-Seq percent confirming:94.7368
LEAP-Seq n confirming:36
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:38

Suggested primers for confirmation by PCR

Suggested primer 1:AGAGTGTGTGCGGCTTTGTA
Suggested primer 2:GAGACGCACTTCAAGGTGGA