Insertion junction: CLIP2.074905_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.074905
Chromosome:plastome
Location:127043
Confidence (%):63
Locus systematic id Locus common name Defline Feature
CreCp.g802316 ChreCp052,2717043,ycf10,cemA (1 of 1) PTHR33650:SF2 - CHLOROPLAST ENVELOPE MEMBRANE PROTEIN; heme-binding protein CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGTGATTCTACTAAAGTTTCAAAATAAATTTTTTCTTCAAATTTTGCTAA
Internal bar code:TTGTCCGGCGTTTCTCGTGCTC

Confirmation - LEAP-Seq

LEAP-Seq distance:141
LEAP-Seq percent confirming:28.5714
LEAP-Seq n confirming:2
LEAP-Seq n nonconfirming:5
LEAP-Seq n unique pos:7

Suggested primers for confirmation by PCR

Suggested primer 1:TGCCCTATACCTACCGTGCA
Suggested primer 2:ATTTCACCCTCTGCGGAAGG