Insertion junction: CLIP2.074923_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.074923
Chromosome:chromosome 4
Location:780297
Confidence (%):63
Locus systematic id Locus common name Defline Feature
Cre04.g217966 (1 of 226) IPR012337 - Ribonuclease H-like domain CDS
Cre04.g800447 (1 of 1) PTHR32166:SF33 - HAT FAMILY DIMERIZATION DOMAIN-CONTAINING PROTEIN CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGATGAGGACGTCCTGGAGCTGCAAGCACGGATACCACATGCGGTAGCAC
Internal bar code:GCACCTCATTAGCGATCTTGTG

Confirmation - LEAP-Seq

LEAP-Seq distance:174
LEAP-Seq percent confirming:50.0
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:2

Suggested primers for confirmation by PCR

Suggested primer 1:ATCCACACCACTTGCCTACG
Suggested primer 2:AGGATCGAACTCGGGTCTGA