Insertion junction: CLIP2.074942_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.074942
Chromosome:chromosome 16
Location:6177854
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g676900 UAA5 UDP-galactose transporter; (1 of 2) K15276 - solute carrier family 35 (adenosine 3'-phospho 5'-phosphosulfate transporter), member B2 (SLC35B2, PAPST1) 3'UTR
Cre16.g677001 (1 of 1) PTHR31596:SF1 - T-CELL ACTIVATION INHIBITOR, MITOCHONDRIAL outside_mRNA

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATTGAAGTGAGAGACACTGGCACGGCGGGGGCATCTAAGGTGTCGAAACA
Internal bar code:GACTGTGCTAAGGACATTGCCG

Confirmation - LEAP-Seq

LEAP-Seq distance:1992
LEAP-Seq percent confirming:91.4894
LEAP-Seq n confirming:43
LEAP-Seq n nonconfirming:4
LEAP-Seq n unique pos:47

Suggested primers for confirmation by PCR

Suggested primer 1:CACCAAATGCGGACATCGTC
Suggested primer 2:TGTTAGCAGCCATAACCCGG