Insertion junction: CLIP2.074957_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.074957
Chromosome:chromosome 1
Location:637362
Confidence (%):40
Locus systematic id Locus common name Defline Feature
Cre01.g003550 (1 of 2) PTHR12231//PTHR12231:SF112 - CTX-RELATED TYPE I TRANSMEMBRANE PROTEIN // RHODANESE-LIKE DOMAIN-CONTAINING PROTEIN 14, CHLOROPLASTIC intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATGGGGGCAGGCACGCGCAAAACACGAGCAATATACCACACCATCGCACC
Internal bar code:TGATAGTCGCCAGGCTTGTATA

Confirmation - LEAP-Seq

LEAP-Seq distance:763
LEAP-Seq percent confirming:20.0
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:4
LEAP-Seq n unique pos:5

Suggested primers for confirmation by PCR

Suggested primer 1:AAGCTGTTGTAGAGGACCGC
Suggested primer 2:GGGGGAAGACGCGTAGTTAC