Insertion junction: CLIP2.074969_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.074969
Chromosome:chromosome 11
Location:2102052
Confidence (%):63
Locus systematic id Locus common name Defline Feature
Cre11.g467751 (1 of 4) K06067 - histone deacetylase 1/2 (HDAC1_2) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCCTCGTCGGGCGCCAGACCCAGAACCTGCCCGGCGCACGGGGAGGGGGC
Internal bar code:TATCAGCATTCCGTGCCATCG

Confirmation - LEAP-Seq

LEAP-Seq distance:766
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:2
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:2

Suggested primers for confirmation by PCR

Suggested primer 1:CGTGCAGGGGTTCACTTTTG
Suggested primer 2:ATACGGCCCACACTCACTTG