Insertion junction: CLIP2.074988_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.074988
Chromosome:chromosome 16
Location:1058964
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g649400 RRM15,CPLD16 Putative RNA methyl transferase; (1 of 1) PTHR11061:SF12 - RNA BINDING PROTEIN-RELATED outside_mRNA

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATGTACGGTATGCGGCAGCCCCGCCGGCTGGCATGGACAAAGGAAGCCCG
Internal bar code:CTGAATGACAGGCAAACTGTGG

Confirmation - LEAP-Seq

LEAP-Seq distance:2500
LEAP-Seq percent confirming:47.8261
LEAP-Seq n confirming:11
LEAP-Seq n nonconfirming:12
LEAP-Seq n unique pos:23

Suggested primers for confirmation by PCR

Suggested primer 1:CCGACCAAGAGCGCATATCT
Suggested primer 2:CGAGGAATGGAGGTAGTCGC