Insertion junction: CLIP2.074988_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.074988
Chromosome:chromosome 16
Location:1058965
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g649400 RRM15,CPLD16 Putative RNA methyl transferase; (1 of 1) PTHR11061:SF12 - RNA BINDING PROTEIN-RELATED outside_mRNA

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGCAGCCACACCCACACAGTCAAACCCCGCAAGCGCGTCTAATCACGTCC
Internal bar code:TTGGGTGTGTGCTGCTACAATC

Confirmation - LEAP-Seq

LEAP-Seq distance:3000
LEAP-Seq percent confirming:43.8596
LEAP-Seq n confirming:25
LEAP-Seq n nonconfirming:32
LEAP-Seq n unique pos:57

Suggested primers for confirmation by PCR

Suggested primer 1:CGAGGAATGGAGGTAGTCGC
Suggested primer 2:CCGACCAAGAGCGCATATCT