Insertion junction: CLIP2.074991_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.074991
Chromosome:chromosome 10
Location:1304739
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g427200 (1 of 781) IPR000104 - Antifreeze protein, type I 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCCCACAGGGAAAGTTGCAGACCAGCTCGTTGTCTTGTTGCCTCTATCGC
Internal bar code:TTACTTTGTGTTCGACGGTGTA

Confirmation - LEAP-Seq

LEAP-Seq distance:1638
LEAP-Seq percent confirming:65.1163
LEAP-Seq n confirming:28
LEAP-Seq n nonconfirming:15
LEAP-Seq n unique pos:43

Suggested primers for confirmation by PCR

Suggested primer 1:CTGGGCAAGTTACAGTCGGT
Suggested primer 2:GCGGAACACCACTCCAAGTA