Insertion junction: CLIP2.074994_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.074994
Chromosome:chromosome 12
Location:2010082
Confidence (%):63
Locus systematic id Locus common name Defline Feature
Cre12.g801373 (1 of 2) IPR000104//IPR000477//IPR005135 - Antifreeze protein, type I // Reverse transcriptase domain // Endonuclease/exonuclease/phosphatase CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGGCGGAGGGCTCCCGGTCTGGTGAAGCGTGTGCGGATATGTATGTGACT
Internal bar code:GTGTCCTGGGCTTTAGTAGTGA

Confirmation - LEAP-Seq

LEAP-Seq distance:5643
LEAP-Seq percent confirming:41.9355
LEAP-Seq n confirming:13
LEAP-Seq n nonconfirming:18
LEAP-Seq n unique pos:31

Suggested primers for confirmation by PCR

Suggested primer 1:ACAGTGCAGTCCCAAAACCA
Suggested primer 2:GTTTGATGCCAGCCCACATG