Insertion junction: CLIP2.075001_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.075001
Chromosome:chromosome 16
Location:2052813
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g657100 (1 of 781) IPR000104 - Antifreeze protein, type I 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AAGGTGGGCTGGCCGTCTCCCCACAATCATCCGCGGCTGCGTGCCTGCCC
Internal bar code:CACGTTGACGACAAGTTAGCAC

Confirmation - LEAP-Seq

LEAP-Seq distance:1487
LEAP-Seq percent confirming:95.8333
LEAP-Seq n confirming:23
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:24

Suggested primers for confirmation by PCR

Suggested primer 1:GCAGCACAGCTAATGGCATC
Suggested primer 2:GTATGTAGCGCCGGTCATGA