Insertion junction: CLIP2.075004_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.075004
Chromosome:chromosome 2
Location:6103939
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g119550 NIP1 NaCl-inducible protein 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCGGCCTGGGTCCCGGCACAGACGTACTTAAGCTGGCCCGCAGCTTCACA
Internal bar code:ATTGTTAAGCTCAATCTAGTGA

Confirmation - LEAP-Seq

LEAP-Seq distance:680
LEAP-Seq percent confirming:78.5714
LEAP-Seq n confirming:11
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:14

Suggested primers for confirmation by PCR

Suggested primer 1:CCTTTCAGGGCCCTTCAGAG
Suggested primer 2:TCGCTGAACTTGGTTCCCTC