Insertion junction: CLIP2.075004_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.075004
Chromosome:chromosome 2
Location:6103995
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g119550 NIP1 NaCl-inducible protein 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCAGGTACCCGCTTGGATTCAGCCCTAGCAATAAGCCACAATCTCGCGGT
Internal bar code:ATTGTTAAGCTCAATCTAGTGA

Confirmation - LEAP-Seq

LEAP-Seq distance:942
LEAP-Seq percent confirming:36.3636
LEAP-Seq n confirming:8
LEAP-Seq n nonconfirming:14
LEAP-Seq n unique pos:22

Suggested primers for confirmation by PCR

Suggested primer 1:TCGCTGAACTTGGTTCCCTC
Suggested primer 2:CCTTTCAGGGCCCTTCAGAG