Insertion junction: CLIP2.075013_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.075013
Chromosome:chromosome 1
Location:5770219
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g041351 (1 of 1) PTHR15967:SF0 - E2F-ASSOCIATED PHOSPHOPROTEIN 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CGGACGCATCACAGGAGCCAGGTAGCCAGGCTGCCAGGTGTCGCAAAAGG
Internal bar code:TAGGTATAATCTCGATCCATCG

Confirmation - LEAP-Seq

LEAP-Seq distance:1967
LEAP-Seq percent confirming:9.375
LEAP-Seq n confirming:3
LEAP-Seq n nonconfirming:29
LEAP-Seq n unique pos:32

Suggested primers for confirmation by PCR

Suggested primer 1:GGTGCTGATGGCCTTCTCTT
Suggested primer 2:GGCGCAATATGTGACGTCAC