Insertion junction: CLIP2.075015_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.075015
Chromosome:chromosome 12
Location:3607135
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g801394 (1 of 8) IPR001163//IPR010920 - LSM domain, eukaryotic/archaea-type // LSM domain 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CATGCAAAGAGCGTTTGGCGCAACCGGACGACACGGGACACTCATTCATG
Internal bar code:ATTTGCATGTGACGTCCGGTAG

Confirmation - LEAP-Seq

LEAP-Seq distance:2998
LEAP-Seq percent confirming:91.3043
LEAP-Seq n confirming:42
LEAP-Seq n nonconfirming:4
LEAP-Seq n unique pos:46

Suggested primers for confirmation by PCR

Suggested primer 1:AGGACGTTCGCGCTCTTTTA
Suggested primer 2:CATCCCTCCCACACACTTCC