Insertion junction: CLIP2.075019_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.075019
Chromosome:chromosome 2
Location:4177609
Confidence (%):40
Locus systematic id Locus common name Defline Feature
Cre02.g104000 3'UTR
Cre02.g104050 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGCCTCTCGATGTTGCCTGGAAACATAGTAGTATAGTACCGTACCAGAAT
Internal bar code:TTTCTTTGGTTGCTGTCATCAG

Confirmation - LEAP-Seq

LEAP-Seq distance:1906
LEAP-Seq percent confirming:22.973
LEAP-Seq n confirming:17
LEAP-Seq n nonconfirming:57
LEAP-Seq n unique pos:74

Suggested primers for confirmation by PCR

Suggested primer 1:AATGACTGCCGCCACTACTC
Suggested primer 2:ATGTGACGCGGTTGAGCTTA