Insertion junction: CLIP2.075027_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.075027
Chromosome:chromosome 3
Location:5489264
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g184600 RWP7 (1 of 1) IPR003035//IPR009057 - RWP-RK domain // Homeodomain-like; RWP-RK transcription factor 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CATCTACAAACAACAAGGGGAACAGGCAGATGCAATGCGCGTCCTTGGAA
Internal bar code:TGGCGTTTACGAGCAGTCGCTA

Confirmation - LEAP-Seq

LEAP-Seq distance:4170
LEAP-Seq percent confirming:83.7209
LEAP-Seq n confirming:36
LEAP-Seq n nonconfirming:7
LEAP-Seq n unique pos:43

Suggested primers for confirmation by PCR

Suggested primer 1:CAAGCCCCAAAGTTGCAGTC
Suggested primer 2:CTGGCCCGAATACGCATTTG