Insertion junction: CLIP2.075027_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.075027
Chromosome:chromosome 3
Location:5489284
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g184600 RWP7 (1 of 1) IPR003035//IPR009057 - RWP-RK domain // Homeodomain-like; RWP-RK transcription factor 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACTGGGATGTTTGGGAGTAGCCTGCGGCTTGCAATATGGCAAGCCAAGCT
Internal bar code:TTGTTAGTCCCGCCGGAATGTA

Confirmation - LEAP-Seq

LEAP-Seq distance:725
LEAP-Seq percent confirming:26.6667
LEAP-Seq n confirming:4
LEAP-Seq n nonconfirming:11
LEAP-Seq n unique pos:15

Suggested primers for confirmation by PCR

Suggested primer 1:CTGGCCCGAATACGCATTTG
Suggested primer 2:CAAGCCCCAAAGTTGCAGTC