| Insertion cassette: | CIB2 |
| Side of cassette: | 3' |
| Strand: | + |
| Strain: | CLIP2.075036 |
| Chromosome: | chromosome 1 |
| Location: | 5715658 |
| Confidence (%): | 80 |
| Locus systematic id | Locus common name | Defline | Feature |
|---|---|---|---|
| Cre01.g040850 | (1 of 1) IPR002048//IPR003368//IPR006626//IPR010308//IPR011050 - EF-hand domain // Polymorphic outer membrane protein repeat // Parallel beta-helix repeat // TRP-like family // Pectin lyase fold/virulence factor | 5'UTR |
Insertion site details | |
| Expected flanking sequence (starting at cassette; orientation from cassette outwards): | ATATAGGCTGAAAGCTTGGAGAGAAGCGCAATCCAAATGATCGAGTCGCG |
| Internal bar code: | ATTTTCATCGTAACTTCATACC |
Confirmation - LEAP-Seq | |
| LEAP-Seq distance: | 5356 |
| LEAP-Seq percent confirming: | 85.2941 |
| LEAP-Seq n confirming: | 29 |
| LEAP-Seq n nonconfirming: | 5 |
| LEAP-Seq n unique pos: | 34 |
Suggested primers for confirmation by PCR | |
| Suggested primer 1: | GGAGCTGCTTCGCGTATTTG |
| Suggested primer 2: | CATGAACGAGAGGCAATGCG |