Insertion junction: CLIP2.075050_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.075050
Chromosome:chromosome 3
Location:3201436
Confidence (%):40
Locus systematic id Locus common name Defline Feature
Cre03.g165200 APG7 Autophagy-related protein, ubiquitin-activating enzyme E1 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CGTCCTCAAGCACATACAGCTTGCCGCCCGCCTACCCGCCCGGCCACCGG
Internal bar code:TAGGCGTTATTTTAATGAGTCC

Confirmation - LEAP-Seq

LEAP-Seq distance:342
LEAP-Seq percent confirming:65.2174
LEAP-Seq n confirming:15
LEAP-Seq n nonconfirming:8
LEAP-Seq n unique pos:23

Suggested primers for confirmation by PCR

Suggested primer 1:CTGCTGCTTCCTCCAACTCA
Suggested primer 2:AAGTGATGTCTCGGCACAGG