Insertion junction: CLIP2.075068_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.075068
Chromosome:chromosome 1
Location:7787745
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g054900 (1 of 781) IPR000104 - Antifreeze protein, type I gene_edge/mRNA_edge/5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCCAACGACATTGGAGGAGGCAGCAGCGGGGGGAGAGGATGAGGACTCAG
Internal bar code:TGAGACCTGAGTGTCTAGCCGC

Confirmation - LEAP-Seq

LEAP-Seq distance:1282
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:19
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:19

Suggested primers for confirmation by PCR

Suggested primer 1:CGTGACGACCTCCTTGTCAA
Suggested primer 2:TGTTCATCGCGGACACTGAA