| Insertion cassette: | CIB2 |
| Side of cassette: | 3' |
| Strand: | + |
| Strain: | CLIP2.075077 |
| Chromosome: | chromosome 6 |
| Location: | 3857384 |
| Confidence (%): | 80 |
| Locus systematic id | Locus common name | Defline | Feature |
|---|---|---|---|
| Cre06.g278182 | 3'UTR | ||
| lncRNA_TCONS_00179360 | 3'UTR |
Insertion site details | |
| Expected flanking sequence (starting at cassette; orientation from cassette outwards): | CAGGTCATGAACACAGCGCCACACACCACCATCTGCATCAGCGGCCCTGT |
| Internal bar code: | ATTGGGCGAATCACTGGCGGGG |
Confirmation - LEAP-Seq | |
| LEAP-Seq distance: | 161 |
| LEAP-Seq percent confirming: | 7.40741 |
| LEAP-Seq n confirming: | 2 |
| LEAP-Seq n nonconfirming: | 25 |
| LEAP-Seq n unique pos: | 27 |
Suggested primers for confirmation by PCR | |
| Suggested primer 1: | CAGGTGTGTGATTGTCGGGA |
| Suggested primer 2: | CAACCAAGTTCCTGTTGCGG |