Insertion junction: CLIP2.075088_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.075088
Chromosome:chromosome 5
Location:2579052
Confidence (%):40
Locus systematic id Locus common name Defline Feature
Cre05.g239600 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGAGGTCCGTGTTCTGCTTGTGGTGGGTAGGGCGGGTGCGCAGGGCGTGC
Internal bar code:GTAGGGTCGGTGTATACCTTGG

Confirmation - LEAP-Seq

LEAP-Seq distance:547
LEAP-Seq percent confirming:25.0
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:4

Suggested primers for confirmation by PCR

Suggested primer 1:GCACACACACACACATGCAT
Suggested primer 2:ACCATAGACCCCATCAGCCT