Insertion junction: CLIP2.075100_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.075100
Chromosome:chromosome 12
Location:4916704
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g524100 ABH1,CBP80 mRNA cap-binding protein; (1 of 1) K12882 - nuclear cap-binding protein subunit 1 (NCBP1, CBP80) 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GACCGACCTGTTGCCCCGCACGCTGCTGTTTCCCCCCTCGGCCCCATCAT
Internal bar code:CGCACTCCGGGTAAGAGGCGGA

Confirmation - LEAP-Seq

LEAP-Seq distance:548
LEAP-Seq percent confirming:23.0769
LEAP-Seq n confirming:24
LEAP-Seq n nonconfirming:80
LEAP-Seq n unique pos:104

Suggested primers for confirmation by PCR

Suggested primer 1:GACGTGGGTGATGGTGTAGG
Suggested primer 2:GTCGTGAAATGATGACGGCG