Insertion junction: CLIP2.075100_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.075100
Chromosome:chromosome 12
Location:4916711
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g524100 ABH1,CBP80 mRNA cap-binding protein; (1 of 1) K12882 - nuclear cap-binding protein subunit 1 (NCBP1, CBP80) 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTCGGTCGTTTGAAGGCCGTGGCAAGGCCGGTGTAGTAGGACAGTCGTCA
Internal bar code:GGTTTGCTGGAATGAAATGTTG

Confirmation - LEAP-Seq

LEAP-Seq distance:488
LEAP-Seq percent confirming:88.8889
LEAP-Seq n confirming:16
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:18

Suggested primers for confirmation by PCR

Suggested primer 1:GTCGTGAAATGATGACGGCG
Suggested primer 2:GACGTGGGTGATGGTGTAGG