Insertion junction: CLIP2.075102_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.075102
Chromosome:chromosome 17
Location:3616746
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g725250 (1 of 39) IPR009003 - Peptidase S1, PA clan 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGATCCAGGCAGAGGGAAAGAGAGAGGGAGAGAGAGAGAGAGTCAGAGTC
Internal bar code:CATGTACCTTTAGCATCGCGTG

Confirmation - LEAP-Seq

LEAP-Seq distance:905
LEAP-Seq percent confirming:57.8947
LEAP-Seq n confirming:11
LEAP-Seq n nonconfirming:8
LEAP-Seq n unique pos:19

Suggested primers for confirmation by PCR

Suggested primer 1:TGAGCTTGCCCTCCAGAATG
Suggested primer 2:TAAAGCGTGAGTGCCTGAGG