Insertion junction: CLIP2.075115_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.075115
Chromosome:chromosome 2
Location:1419295
Confidence (%):63
Locus systematic id Locus common name Defline Feature
Cre02.g083400 (1 of 1) PF07000 - Protein of unknown function (DUF1308) (DUF1308) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GACAGGAGGCTGACCGGGCCACAGGGCTCCGGCCCACAACCCCCGCCTCT
Internal bar code:TTAATGCCTCTCCGGGTGTTCT

Confirmation - LEAP-Seq

LEAP-Seq distance:550
LEAP-Seq percent confirming:36.5854
LEAP-Seq n confirming:15
LEAP-Seq n nonconfirming:26
LEAP-Seq n unique pos:41

Suggested primers for confirmation by PCR

Suggested primer 1:GTTTCCGTGAAGCTGCCTTG
Suggested primer 2:CGCATGCAAACAGACACACA