Insertion junction: CLIP2.075116_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.075116
Chromosome:chromosome 16
Location:7426894
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g681014 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TAGCGTGCAAGAGGTATTAGCGATTGCGCACGAGTCATGGTGTCCTGCGG
Internal bar code:TTGCGCACGGTGGGTTATTTTA

Confirmation - LEAP-Seq

LEAP-Seq distance:2504
LEAP-Seq percent confirming:87.5
LEAP-Seq n confirming:49
LEAP-Seq n nonconfirming:7
LEAP-Seq n unique pos:56

Suggested primers for confirmation by PCR

Suggested primer 1:GTACGATGGGAGCGAGTGAG
Suggested primer 2:GTGGCAAAGAGGGGGCTTAT