Insertion junction: CLIP2.075117_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.075117
Chromosome:chromosome 10
Location:5632914
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g458800 SRR31 Scavenger receptor cysteine rich (SRCR) protein; (1 of 20) IPR001190//IPR017448 - SRCR domain // SRCR-like domain 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGATGCCTCCCCGTCCTGACAGCCCCAAGCCCAGCCCGCCCAAACCGCCC
Internal bar code:CTGGATGGCTTTAAGGTTATAT

Confirmation - LEAP-Seq

LEAP-Seq distance:3133
LEAP-Seq percent confirming:11.1111
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:8
LEAP-Seq n unique pos:9

Suggested primers for confirmation by PCR

Suggested primer 1:TCTTCCAAACAACACCGCCT
Suggested primer 2:CTAGCCCTTGTTCCCACTGG