Insertion junction: CLIP2.075118_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.075118
Chromosome:chromosome 6
Location:7330582
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g299650 CLPR6 (1 of 3) PTHR10381//PTHR10381:SF24 - ATP-DEPENDENT CLP PROTEASE PROTEOLYTIC SUBUNIT // SUBFAMILY NOT NAMED; inactive subunit of chloroplast ClpP complex 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TAAGATAGTAAGCGCCTGACTTATTGCGATGCTTGCCTAGACCATCGGTG
Internal bar code:GCGCTACCGCGGCTGCATGTCC

Confirmation - LEAP-Seq

LEAP-Seq distance:2561
LEAP-Seq percent confirming:59.375
LEAP-Seq n confirming:19
LEAP-Seq n nonconfirming:13
LEAP-Seq n unique pos:32

Suggested primers for confirmation by PCR

Suggested primer 1:GTAGCCGCCGATGAAGATGA
Suggested primer 2:GAGCAGAGGTACTTGGGCAG