Insertion junction: CLIP2.075122_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.075122
Chromosome:chromosome 7
Location:5935107
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g354250 PGK2 (1 of 2) PF00162 - Phosphoglycerate kinase (PGK); Phosphoglycerate kinase 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TACAACAACTCATGCAAACACACGCTTCCGAGCATGCAGGCACCAAAAGA
Internal bar code:TGGTTAATTGGCAGTGCGTGTA

Confirmation - LEAP-Seq

LEAP-Seq distance:2023
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:63
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:63

Suggested primers for confirmation by PCR

Suggested primer 1:CGTCCCTGGAGTTGATCGAG
Suggested primer 2:TTAGTGGTGGCTGCTTCCTG