Insertion junction: CLIP2.075122_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.075122
Chromosome:chromosome 7
Location:5935329
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g354250 PGK2 (1 of 2) PF00162 - Phosphoglycerate kinase (PGK); Phosphoglycerate kinase 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTCTTGCACGTGGCGACTGGCACGGATCACGCCATCGGCGCGGTCGGTCG
Internal bar code:TGGTTAATTGGCAGTGCGTGTA

Confirmation - LEAP-Seq

LEAP-Seq distance:1936
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:16
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:16

Suggested primers for confirmation by PCR

Suggested primer 1:TTAGTGGTGGCTGCTTCCTG
Suggested primer 2:CGTCCCTGGAGTTGATCGAG