Insertion junction: CLIP2.075123_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.075123
Chromosome:chromosome 2
Location:2105050
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g089100 COPD1 (1 of 1) PTHR10121 - COATOMER SUBUNIT DELTA; Delta subunit of COP-I complex outside_mRNA
Cre02.g089150 (1 of 1) K11314 - transcriptional adapter 2-alpha (TADA2A, ADA2) 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTTCTGAGTCCTGACTGCAAAACGGGAAGCTGCGGGCGGAACGCCAATGC
Internal bar code:AACGTTAACATTGTCCCACCGG

Confirmation - LEAP-Seq

LEAP-Seq distance:1948
LEAP-Seq percent confirming:95.5224
LEAP-Seq n confirming:64
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:67

Suggested primers for confirmation by PCR

Suggested primer 1:CAACACACACATGCACCAGG
Suggested primer 2:CTCCTTCTTCCGGTTGGACC