Insertion junction: CLIP2.075130_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.075130
Chromosome:chromosome 3
Location:4313113
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g174300 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GACGAGTGTGGTGGGAACGAATGCGTACGGTACGGTGGGTGAGCAATACG
Internal bar code:CGGTGTGTTGATACGCCTCCAT

Confirmation - LEAP-Seq

LEAP-Seq distance:5413
LEAP-Seq percent confirming:85.4839
LEAP-Seq n confirming:53
LEAP-Seq n nonconfirming:9
LEAP-Seq n unique pos:62

Suggested primers for confirmation by PCR

Suggested primer 1:CCTGCCGAAAAGTTTGCGAA
Suggested primer 2:GAAGCATGATCGGCTGCAAG