Insertion junction: CLIP2.075148_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.075148
Chromosome:chromosome 8
Location:3199079
Confidence (%):40
Locus systematic id Locus common name Defline Feature
Cre08.g376720 CEP7 Cysteine endopeptidase; (1 of 5) 3.4.22.33 - Fruit bromelain intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TACACACACACGGGCTCCCACTGACGGCCTCTCACTGATGGACTCCCATC
Internal bar code:GCAAAAGCAACTGCGGAGCTGA

Confirmation - LEAP-Seq

LEAP-Seq distance:813
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:20
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:20

Suggested primers for confirmation by PCR

Suggested primer 1:CCATCCCCGACGGTAGATTG
Suggested primer 2:CGCTCATCGCTGCTTAAACC