Insertion junction: CLIP2.075150_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.075150
Chromosome:plastome
Location:102941
Confidence (%):63
Locus systematic id Locus common name Defline Feature
CreCp.g802309 2716996,petG,ChreCp045 (1 of 1) K02640 - cytochrome b6-f complex subunit 5 (petG); cytochrome b6/f complex subunit V 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TAAACACCTGACAGTAAAGCTAGAAACCAGTCGAGAGTAACAATGCAATT
Internal bar code:TAAAACGGTGAAAGGGGCAAAC

Confirmation - LEAP-Seq

LEAP-Seq distance:142
LEAP-Seq percent confirming:50.0
LEAP-Seq n confirming:2
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:4

Suggested primers for confirmation by PCR

Suggested primer 1:GCCACTGCCGTCCTAAGTAA
Suggested primer 2:TGGAGCCATTTCAAGGTGCA