Insertion junction: CLIP2.075152_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.075152
Chromosome:chromosome 12
Location:1081233
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g491500 UBA2,UBA3,UBC1 RUB1/NEDD8 E1 activating enzyme; (1 of 1) K10686 - ubiquitin-activating enzyme E1 C (UBE1C, UBA3) 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGGAACTACGTCATTGTCGCGGTCGCTCAAGTGACCCCTCTCCCCACCCC
Internal bar code:GTGGGCGACCCTGATAATACTG

Confirmation - LEAP-Seq

LEAP-Seq distance:364
LEAP-Seq percent confirming:11.7647
LEAP-Seq n confirming:4
LEAP-Seq n nonconfirming:30
LEAP-Seq n unique pos:34

Suggested primers for confirmation by PCR

Suggested primer 1:TACGGCAGTACGGACCTGTA
Suggested primer 2:GATGAAGGAGGCGTAGGTCG