Insertion junction: CLIP2.075155_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.075155
Chromosome:chromosome 13
Location:96876
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre13.g562475 (1 of 1) PTHR10585//PTHR10585:SF10 - ER LUMEN PROTEIN RETAINING RECEPTOR // ER LUMEN PROTEIN RETAINING RECEPTOR FAMILY PROTEIN-RELATED 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTGACATTGAACGCGCGCGCTCTGATTGACCACTGCTGCCCTGCTGCATG
Internal bar code:GTTCTTACGTAGGGTTCGTTGG

Confirmation - LEAP-Seq

LEAP-Seq distance:977
LEAP-Seq percent confirming:93.5484
LEAP-Seq n confirming:29
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:31

Suggested primers for confirmation by PCR

Suggested primer 1:TATACACCCCCTCGAACCGT
Suggested primer 2:CATGTCCAGACAGCCAGGTT