Insertion junction: CLIP2.075156_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.075156
Chromosome:chromosome 12
Location:3784564
Confidence (%):40
Locus systematic id Locus common name Defline Feature
Cre12.g514450 SPL20 Pre-mRNA splicing factor; (1 of 1) K12829 - splicing factor 3B subunit 2 (SF3B2, SAP145, CUS1) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTCGCCTGCCCCACATGCGGATGTGCGCCGCATGCCGCCCCAGGACCCAG
Internal bar code:CTTATTGTACGACATAACTTTC

Confirmation - LEAP-Seq

LEAP-Seq distance:470
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:6
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:6

Suggested primers for confirmation by PCR

Suggested primer 1:TAACCCCAACCCGCTGTAAC
Suggested primer 2:TTCCCACTGCGGACTTCATC