Insertion junction: CLIP2.075160_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.075160
Chromosome:chromosome 2
Location:3576370
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g099500 CVL1 Fe2+/Mn2+ transporter, VIT1/CCC1 family; (1 of 2) PF01988 - VIT family (VIT1) 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTGGGACAAGAGGACCACCGCTGGGCAAATGCTGTTACGGGACGTACAAC
Internal bar code:CATTCAGGGAGGAGACATCTGT

Confirmation - LEAP-Seq

LEAP-Seq distance:2495
LEAP-Seq percent confirming:56.0
LEAP-Seq n confirming:14
LEAP-Seq n nonconfirming:11
LEAP-Seq n unique pos:25

Suggested primers for confirmation by PCR

Suggested primer 1:CCTTCTCGCCACCTTCTTGT
Suggested primer 2:CTGCGAATCTGACACAGGGT