Insertion junction: CLIP2.075162_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.075162
Chromosome:chromosome 3
Location:2661264
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g160700 (1 of 2) IPR000679//IPR013088 - Zinc finger, GATA-type // Zinc finger, NHR/GATA-type 5'UTR_intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCTGCTTGGTCATCGGCCGGTCGACGGATGCCGCGGTGCAAGGGTTTTGC
Internal bar code:CTTGAAAGCATCGATACGCTGG

Confirmation - LEAP-Seq

LEAP-Seq distance:3568
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:67
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:67

Suggested primers for confirmation by PCR

Suggested primer 1:AACAGTCTCTGGTGAAGGCG
Suggested primer 2:TTGCCTCAAACTCAAAGCGC