Insertion junction: CLIP2.075166_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.075166
Chromosome:chromosome 5
Location:3321720
Confidence (%):40
Locus systematic id Locus common name Defline Feature
Cre05.g232500 FXL8 (1 of 2) IPR000014//IPR011990 - PAS domain // Tetratricopeptide-like helical domain; FixL-like PAS domain protein intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACACACACACACACACACTTACACACACACACACACACACACACACACAC
Internal bar code:CCGTACTCCTACCCCTGCAGCA

Confirmation - LEAP-Seq

LEAP-Seq distance:246
LEAP-Seq percent confirming:16.6667
LEAP-Seq n confirming:2
LEAP-Seq n nonconfirming:10
LEAP-Seq n unique pos:12

Suggested primers for confirmation by PCR

Suggested primer 1:GTGTGTGTGCAATAGGGGGA
Suggested primer 2:ACGCGAATCCTTACAGGCAA