Insertion junction: CLIP2.075166_3

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.075166
Chromosome:chromosome 16
Location:2830058
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g662750 THB11 (1 of 6) PTHR10681//PTHR10681:SF118 - THIOREDOXIN PEROXIDASE // SUBFAMILY NOT NAMED; Truncated hemoglobin 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TAAATGAGCCGCTAGCTGTTGACATAATCTAGTATAATTTGCTACTCCGC
Internal bar code:TGTTTCATGCTATACCGTTTTC

Confirmation - LEAP-Seq

LEAP-Seq distance:632
LEAP-Seq percent confirming:83.3333
LEAP-Seq n confirming:5
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:6

Suggested primers for confirmation by PCR

Suggested primer 1:CTCGATGCATGTGTCGCAAG
Suggested primer 2:GCAGACAGATAAAGCAGCGC