Insertion junction: CLIP2.075171_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.075171
Chromosome:chromosome 11
Location:3771747
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre11.g479250 RANGAP1 RAN GTPase-activating protein 1; (1 of 1) K14319 - Ran GTPase-activating protein 1 (RANGAP1) 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGTGTGTGTGCCACCAGCTCCTGCCAGGTTCGAGCGCAATACTTTGCCCT
Internal bar code:AGTGCTGGATCATGTACAGGGC

Confirmation - LEAP-Seq

LEAP-Seq distance:1779
LEAP-Seq percent confirming:97.3333
LEAP-Seq n confirming:73
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:75

Suggested primers for confirmation by PCR

Suggested primer 1:CAGGAGCTTCGGGTTCAAGT
Suggested primer 2:ATTAGCACGTCAAGGGACCG