Insertion junction: CLIP2.075171_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.075171
Chromosome:chromosome 11
Location:3771747
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre11.g479250 RANGAP1 RAN GTPase-activating protein 1; (1 of 1) K14319 - Ran GTPase-activating protein 1 (RANGAP1) 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGCTGGCGCCATCCCGGGACCCCTGCAGCGGCCACGGCAGGCCAAGGCGA
Internal bar code:GATCGCCATCTTCTGAATGTTT

Confirmation - LEAP-Seq

LEAP-Seq distance:1834
LEAP-Seq percent confirming:96.875
LEAP-Seq n confirming:31
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:32

Suggested primers for confirmation by PCR

Suggested primer 1:ATTAGCACGTCAAGGGACCG
Suggested primer 2:CAGGAGCTTCGGGTTCAAGT